Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgcj/ecac family oxidoreductase | ATN00_RS14510 | Not Available | Negative | 2967610 - 2968023 | 15416.2 |
| lysr family transcriptional regulator | ATN00_RS14515 | P52660 | Negative | 2968030 - 2968821 | 27938.6 |
| co2+/mg2+ efflux protein apag | ATN00_RS14520 | B0UC46 | Negative | 2968818 - 2969216 | 14513.1 |
| plp-dependent aspartate aminotransferase family protein | ATN00_RS14525 | P9WGB4 | Negative | 2969250 - 2970458 | 43821.5 |
| 3-isopropylmalate dehydrogenase | ATN00_RS14530 | Q2G4X5 | Negative | 2970469 - 2971515 | 36553.9 |
| dna repair protein reco | ATN00_RS14535 | A5VEW5 | Negative | 2971568 - 2972302 | 25700.3 |
| acetyl-coa hydrolase/transferase family protein | ATN00_RS14540 | B3EY95 | Negative | 2972312 - 2973826 | 54165.0 |
| lysr family transcriptional regulator | ATN00_RS14545 | P30864 | Positive | 2973937 - 2974818 | 32105.9 |
| excinuclease abc subunit uvrc | ATN00_RS14550 | Q1GU73 | Negative | 2974890 - 2976806 | 71277.4 |
| atp synthase subunit b | ATN00_RS14555 | A5VEV8 | Negative | 2976935 - 2977546 | 20971.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

