Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit alpha | ATN00_RS14120 | A5V9W7 | Positive | 2889011 - 2889832 | 27951.7 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | ATN00_RS14125 | Q2G8S9 | Positive | 2889829 - 2890680 | 31218.0 |
| folylpolyglutamate synthase/dihydrofolate synthase family protein | ATN00_RS14130 | Q05865 | Positive | 2890711 - 2892033 | 46884.9 |
| duf6628 family protein | ATN00_RS14135 | Not Available | Positive | 2892099 - 2892539 | 15472.9 |
| ampg family muropeptide mfs transporter | ATN00_RS14140 | Q92I85 | Negative | 2892524 - 2893849 | 46562.8 |
| response regulator | ATN00_RS14145 | Not Available | Negative | 2893919 - 2894377 | 16394.8 |
| pseudouridine synthase | ATN00_RS14150 | Q4UL59 | Positive | 2894549 - 2895481 | 33900.1 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | ATN00_RS14155 | Not Available | Positive | 2895647 - 2896186 | 19287.1 |
| hypothetical protein | ATN00_RS14160 | Not Available | Negative | 2896304 - 2896714 | 13653.0 |
| gfa family protein | ATN00_RS14165 | Not Available | Negative | 2896843 - 2897238 | 14424.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

