Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rata family toxin | ATN00_RS14020 | Q8FEY4 | Negative | 2869512 - 2869988 | 17971.3 |
| lipoyl synthase | ATN00_RS14025 | Q1GTM7 | Negative | 2869992 - 2870918 | 34110.2 |
| carbonic anhydrase | ATN00_RS14030 | P46512 | Positive | 2870993 - 2871646 | 23661.1 |
| nyn domain-containing protein | ATN00_RS14035 | Not Available | Positive | 2871646 - 2872398 | 27455.4 |
| acylphosphatase | ATN00_RS14040 | A1WDC8 | Positive | 2872395 - 2872676 | 10335.5 |
| energy-dependent translational throttle protein etta | ATN00_RS14045 | P45127 | Negative | 2872961 - 2874640 | 62447.4 |
| hypothetical protein | ATN00_RS14050 | Not Available | Positive | 2875016 - 2875219 | 6502.51 |
| Trna-pro | Not Available | Not Available | Positive | 2875375 - 2875451 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2875569 - 2875644 | Not Available |
| polysaccharide deacetylase family protein | ATN00_RS14065 | Not Available | Negative | 2875670 - 2876707 | 37727.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

