Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphohydrolase | ATN00_RS13970 | P0AEY4 | Positive | 2857684 - 2858463 | 28682.1 |
| gtpase hflx | ATN00_RS13975 | A0L4B2 | Negative | 2858488 - 2859813 | 48274.7 |
| rna chaperone hfq | ATN00_RS13980 | Q28Q51 | Negative | 2859866 - 2860351 | 17955.1 |
| sigma-54 dependent transcriptional regulator | ATN00_RS13985 | Q04849 | Negative | 2860477 - 2861850 | 50554.6 |
| atp-binding protein | ATN00_RS13990 | Q04850 | Negative | 2861840 - 2864077 | 81217.0 |
| nitrogen regulation protein nr(i) | ATN00_RS13995 | P45671 | Negative | 2864193 - 2865638 | 53270.3 |
| nitrogen regulation protein nr(ii) | ATN00_RS14000 | P10578 | Negative | 2865638 - 2866741 | 39579.7 |
| trna dihydrouridine synthase dusb | ATN00_RS14005 | P45672 | Negative | 2866744 - 2867763 | 36984.1 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | ATN00_RS14010 | A5V2U9 | Positive | 2867855 - 2869042 | 42081.7 |
| cina family protein | ATN00_RS14015 | P51967 | Positive | 2869048 - 2869566 | 17726.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

