Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | ATN00_RS22275 | Q06238 | Negative | 23653 - 26562 | 109016.0 |
| hypothetical protein | ATN00_RS24255 | Not Available | Negative | 26874 - 26996 | 4293.13 |
| hypothetical protein | ATN00_RS22280 | Not Available | Negative | 27106 - 27519 | 14577.1 |
| ggdef domain-containing protein | ATN00_RS22285 | Q9HT84 | Negative | 27516 - 28427 | 32501.0 |
| helix-turn-helix domain-containing protein | ATN00_RS23195 | Not Available | Negative | 28789 - 29022 | 8452.12 |
| duf6118 family protein | ATN00_RS22290 | Not Available | Negative | 29019 - 29756 | 26602.6 |
| ti-type conjugative transfer relaxase traa | ATN00_RS22295 | P55418 | Negative | 29914 - 33039 | 114528.0 |
| conjugal transfer protein trad | ATN00_RS22300 | Not Available | Positive | 33216 - 33521 | 10490.2 |
| conjugal transfer protein trad | ATN00_RS22305 | Not Available | Positive | 33559 - 33795 | 8576.03 |
| hypothetical protein | ATN00_RS22310 | Not Available | Positive | 33788 - 34063 | 9796.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

