Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | ATN00_RS13870 | Q9A2M1 | Positive | 2833140 - 2833850 | 25832.8 |
| double-strand break repair protein addb | ATN00_RS13875 | Not Available | Positive | 2833843 - 2836818 | 108039.0 |
| double-strand break repair helicase adda | ATN00_RS13880 | B1YKM8 | Positive | 2836799 - 2840209 | 124617.0 |
| thioredoxin trxa | ATN00_RS13885 | P08058 | Positive | 2840275 - 2840595 | 11336.6 |
| inositol monophosphatase family protein | ATN00_RS13890 | Not Available | Negative | 2840676 - 2841473 | 28477.2 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | ATN00_RS13895 | Q5NP13 | Negative | 2841473 - 2842699 | 42352.9 |
| preprotein translocase subunit seca | ATN00_RS13900 | Q1GS43 | Positive | 2842908 - 2845643 | 102216.0 |
| Trna-ser | Not Available | Not Available | Positive | 2845877 - 2845966 | Not Available |
| lytic transglycosylase domain-containing protein | ATN00_RS13910 | P41052 | Positive | 2846099 - 2847139 | 37688.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | ATN00_RS13915 | P08506 | Positive | 2847240 - 2848403 | 41203.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

