Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | ATN00_RS13820 | Not Available | Positive | 2821094 - 2821864 | 27628.0 |
| m2 family metallopeptidase | ATN00_RS13825 | Q10751 | Positive | 2821924 - 2823738 | 67293.8 |
| diguanylate cyclase | ATN00_RS13830 | Q83KM9 | Positive | 2823771 - 2824919 | 41244.9 |
| amp nucleosidase | ATN00_RS13835 | P0AE13 | Negative | 2824926 - 2826380 | 53953.3 |
| peroxiredoxin | ATN00_RS13840 | Q69TY4 | Negative | 2826476 - 2826958 | 16869.2 |
| yqge/algh family protein | ATN00_RS13845 | Q2GAJ3 | Positive | 2827110 - 2827670 | 19973.4 |
| adenosylhomocysteinase | ATN00_RS13850 | Q2G6T1 | Positive | 2827790 - 2829199 | 51040.4 |
| pas domain-containing sensor histidine kinase | ATN00_RS13855 | Q9RQQ9 | Positive | 2829364 - 2831712 | 84621.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | ATN00_RS13860 | P0AF68 | Positive | 2831717 - 2832163 | 16245.6 |
| aminoglycoside phosphotransferase family protein | ATN00_RS13865 | Q9I5U1 | Positive | 2832160 - 2833143 | 36299.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

