Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | ATN00_RS13430 | O30807 | Negative | 2718941 - 2721208 | 80995.1 |
| lysr family transcriptional regulator | ATN00_RS13435 | P76250 | Negative | 2721219 - 2722142 | 33211.1 |
| malate synthase g | ATN00_RS13440 | Q98DK4 | Positive | 2722232 - 2724337 | 75340.7 |
| alanine--trna ligase | ATN00_RS13445 | Q2G8V0 | Positive | 2724451 - 2727108 | 94989.0 |
| cation:proton antiporter | ATN00_RS13450 | O65272 | Negative | 2727213 - 2728997 | 62497.9 |
| coenzyme f420-0:l-glutamate ligase | ATN00_RS13460 | O27098 | Positive | 2729255 - 2730031 | 27123.1 |
| 2-phospho-l-lactate transferase | ATN00_RS13465 | Q9KZK9 | Positive | 2730028 - 2730969 | 33224.1 |
| 2-phospho-l-lactate guanylyltransferase | ATN00_RS13470 | Not Available | Positive | 2730975 - 2731556 | 21213.8 |
| acetyl-coa c-acetyltransferase | ATN00_RS13475 | Q9ZHI1 | Positive | 2731730 - 2732941 | 42232.6 |
| lysr substrate-binding domain-containing protein | ATN00_RS13480 | Not Available | Negative | 2733315 - 2734235 | 34231.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

