Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | ATN00_RS00445 | P75849 | Negative | 83971 - 84627 | 23548.1 |
| rrf2 family transcriptional regulator | ATN00_RS00450 | O68025 | Negative | 84690 - 85124 | 16331.6 |
| arsc family reductase | ATN00_RS00455 | P24178 | Negative | 85241 - 85597 | 13063.7 |
| rida family protein | ATN00_RS00460 | Not Available | Negative | 85604 - 85984 | 13593.1 |
| hypothetical protein | ATN00_RS00465 | Not Available | Positive | 86122 - 86415 | 10535.5 |
| efflux transporter outer membrane subunit | ATN00_RS00470 | Not Available | Negative | 86422 - 87870 | 50702.2 |
| dha2 family efflux mfs transporter permease subunit | ATN00_RS00475 | P44927 | Negative | 87874 - 89406 | 55965.5 |
| hlyd family secretion protein | ATN00_RS00480 | Q9RQ30 | Negative | 89403 - 90509 | 39223.4 |
| lysr family transcriptional regulator | ATN00_RS00485 | P10151 | Positive | 90635 - 91585 | 33906.1 |
| pepsy domain-containing protein | ATN00_RS00495 | Not Available | Negative | 91872 - 93461 | 56610.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

