Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgm family class a beta-lactamase | ATN00_RS13380 | P96465 | Positive | 2710809 - 2711738 | 32634.0 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 2711795 - 2711892 | Not Available |
| dna polymerase iii subunit gamma/tau | ATN00_RS13390 | P06710 | Positive | 2711963 - 2713573 | 57709.4 |
| ybab/ebfc family nucleoid-associated protein | ATN00_RS13395 | Q4UJS3 | Positive | 2713577 - 2713900 | 11490.8 |
| endopeptidase la | ATN00_RS13400 | P77810 | Positive | 2714031 - 2716427 | 87435.8 |
| hu family dna-binding protein | ATN00_RS13405 | P0A3H2 | Positive | 2716622 - 2716894 | 9373.16 |
| Trna-his | Not Available | Not Available | Positive | 2717134 - 2717210 | Not Available |
| phosphoribosyl-amp cyclohydrolase | ATN00_RS13415 | A5V3S9 | Positive | 2717276 - 2717647 | 13382.9 |
| hypothetical protein | ATN00_RS13420 | Not Available | Positive | 2717634 - 2718167 | 18160.7 |
| l,d-transpeptidase family protein | ATN00_RS13425 | Not Available | Negative | 2718189 - 2718881 | 23958.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

