Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | ATN00_RS13330 | Not Available | Positive | 2703334 - 2703630 | 10964.0 |
| trmh family rna methyltransferase | ATN00_RS13335 | A0A0H2ZF87 | Negative | 2703627 - 2704700 | 39201.8 |
| transcriptional regulator nrdr | ATN00_RS13340 | A5V5D2 | Negative | 2704783 - 2705244 | 17616.9 |
| serine hydroxymethyltransferase | ATN00_RS13345 | A5V5D1 | Negative | 2705363 - 2706682 | 46403.3 |
| ribose 5-phosphate isomerase b | ATN00_RS13350 | P39156 | Negative | 2706694 - 2707131 | 14931.8 |
| hypothetical protein | ATN00_RS13355 | Not Available | Positive | 2707233 - 2707430 | 6722.65 |
| alpha/beta hydrolase | ATN00_RS13360 | Q9ZD73 | Negative | 2707503 - 2708159 | 24146.0 |
| cysteine desulfurase family protein | ATN00_RS13365 | Q01179 | Positive | 2708291 - 2709346 | 36628.9 |
| cysteine desulfurase family protein | ATN00_RS13370 | Q1RHY6 | Positive | 2709313 - 2710437 | 39501.6 |
| 2fe-2s iron-sulfur cluster-binding protein | ATN00_RS13375 | Q8SV19 | Positive | 2710453 - 2710788 | 11834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

