Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ATN00_RS13280 | P74168 | Negative | 2691558 - 2692964 | 49957.6 |
| tonb-dependent receptor | ATN00_RS13285 | Q8X7W7 | Negative | 2692973 - 2695423 | 88057.5 |
| hypothetical protein | ATN00_RS13290 | Not Available | Negative | 2696022 - 2697215 | 45207.1 |
| Trna-lys | Not Available | Not Available | Positive | 2697452 - 2697527 | Not Available |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | ATN00_RS13300 | P43777 | Negative | 2697570 - 2698082 | 19157.4 |
| uracil-dna glycosylase | ATN00_RS13305 | Q5SJ65 | Positive | 2698109 - 2698762 | 23878.9 |
| n-carbamoylputrescine amidase | ATN00_RS13310 | Q9XGI9 | Negative | 2698766 - 2699614 | 31497.3 |
| agmatine deiminase family protein | ATN00_RS13315 | A7FEY8 | Negative | 2699653 - 2700636 | 34951.9 |
| m28 family metallopeptidase | ATN00_RS13320 | Not Available | Negative | 2700727 - 2702406 | 59384.9 |
| 30s ribosomal protein s4 | ATN00_RS13325 | Q1GV16 | Negative | 2702538 - 2703152 | 23161.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

