Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain fatty acyl-coa regulator family protein | ATN00_RS13180 | Q3J4E6 | Negative | 2666835 - 2668250 | 52245.5 |
| acyl-coa carboxylase subunit beta | ATN00_RS13185 | Q3J4E3 | Positive | 2668373 - 2669905 | 55580.7 |
| beta-ketothiolase bktb | ATN00_RS13190 | Q0KBP1 | Positive | 2669951 - 2671141 | 40960.5 |
| methylmalonyl-coa epimerase | ATN00_RS13195 | Q3IZP4 | Positive | 2671138 - 2671575 | 15826.1 |
| methylmalonyl-coa mutase | ATN00_RS13200 | Q3J4D7 | Positive | 2671620 - 2673773 | 77954.2 |
| biotin synthase biob | ATN00_RS13205 | A5VAC6 | Positive | 2673770 - 2674771 | 35894.1 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | ATN00_RS13210 | Q5LUF3 | Positive | 2674871 - 2676868 | 72120.8 |
| pp_02631 | ATN00_RS13215 | Not Available | Positive | 2677003 - 2677374 | Not Available |
| mfs transporter | ATN00_RS13220 | P0C0L8 | Positive | 2677483 - 2679069 | 57110.0 |
| alanine racemase | ATN00_RS13225 | Q2RXD1 | Positive | 2679110 - 2680156 | 37784.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

