Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii plp-dependent enzyme | ATN00_RS13080 | Q8BVM4 | Negative | 2645730 - 2646923 | 43058.2 |
| carboxynorspermidine decarboxylase | ATN00_RS13085 | A8FNH9 | Negative | 2647071 - 2648243 | 42818.2 |
| saccharopine dehydrogenase family protein | ATN00_RS13090 | P0DPE4 | Negative | 2648343 - 2649548 | 44623.3 |
| duf1801 domain-containing protein | ATN00_RS13095 | Not Available | Positive | 2649678 - 2650100 | 15483.5 |
| gfa family protein | ATN00_RS13100 | Not Available | Negative | 2650110 - 2650457 | 12437.7 |
| duf2155 domain-containing protein | ATN00_RS22940 | Not Available | Negative | 2650506 - 2650861 | 12460.8 |
| duf3419 family protein | ATN00_RS13110 | Not Available | Positive | 2651054 - 2652277 | 45474.1 |
| class i sam-dependent methyltransferase | ATN00_RS13115 | Not Available | Positive | 2652274 - 2652921 | 23585.5 |
| 5-aminolevulinate synthase | ATN00_RS13120 | P43089 | Negative | 2652979 - 2654199 | 44439.4 |
| glutamate racemase | ATN00_RS13125 | Q1GTU9 | Negative | 2654329 - 2655132 | 28036.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

