Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | ATN00_RS13030 | Not Available | Negative | 2633437 - 2635218 | 64354.3 |
| uracil-dna glycosylase family protein | ATN00_RS13035 | Not Available | Negative | 2635215 - 2635922 | 25011.2 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | ATN00_RS13040 | Q9HZP5 | Positive | 2636062 - 2637714 | 60771.7 |
| tetratricopeptide repeat protein | ATN00_RS13045 | Not Available | Positive | 2637749 - 2639359 | 57525.2 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | ATN00_RS13050 | A5VDT3 | Positive | 2639367 - 2640242 | 31300.6 |
| n-formylglutamate amidohydrolase | ATN00_RS13055 | Not Available | Positive | 2640239 - 2640955 | 26239.6 |
| dihydroxy-acid dehydratase | ATN00_RS13060 | A7HXI4 | Positive | 2641001 - 2642722 | 60902.8 |
| hypothetical protein | ATN00_RS13065 | Not Available | Positive | 2642703 - 2643068 | 12830.4 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | ATN00_RS13070 | B5YIM0 | Positive | 2643071 - 2644459 | 47408.0 |
| class i sam-dependent rna methyltransferase | ATN00_RS13075 | Q9X3W2 | Positive | 2644456 - 2645661 | 42694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

