Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspj | ATN00_RS12835 | Not Available | Positive | 2590984 - 2591622 | 23025.4 |
| type ii secretion system minor pseudopilin gspk | ATN00_RS12840 | P31706 | Positive | 2591615 - 2592604 | 34581.6 |
| type ii secretion system protein gspl | ATN00_RS12845 | Not Available | Positive | 2592601 - 2593719 | 39301.5 |
| type ii secretion system protein gspm | ATN00_RS12850 | Not Available | Positive | 2593716 - 2594204 | 17297.2 |
| type ii secretion system protein n | ATN00_RS12855 | Not Available | Positive | 2594201 - 2594923 | 25397.3 |
| a24 family peptidase | ATN00_RS12860 | P45794 | Positive | 2594920 - 2595672 | 25806.3 |
| duf2155 domain-containing protein | ATN00_RS12865 | Not Available | Negative | 2595720 - 2596298 | 22301.8 |
| tn3 family transposase | ATN00_RS12870 | Q06238 | Positive | 2596424 - 2599333 | 109016.0 |
| recombinase family protein | ATN00_RS12875 | Not Available | Positive | 2599374 - 2600342 | 35758.8 |
| hypothetical protein | ATN00_RS12880 | Not Available | Negative | 2600309 - 2601229 | 32106.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

