Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | ATN00_RS12785 | Not Available | Positive | 2580875 - 2582179 | 45161.5 |
| nuclear transport factor 2 family protein | ATN00_RS12790 | Not Available | Negative | 2582270 - 2582659 | 14728.4 |
| 2og-fe(ii) oxygenase | ATN00_RS12795 | Not Available | Negative | 2582644 - 2583297 | 24206.7 |
| type ii secretion system protein n | ATN00_RS12800 | Not Available | Positive | 2583470 - 2584297 | 29130.8 |
| type ii secretion system secretin gspd | ATN00_RS12805 | E3PJ86 | Positive | 2584294 - 2586483 | 76654.1 |
| type ii secretion system atpase gspe | ATN00_RS12810 | Q00512 | Positive | 2586480 - 2588021 | 55449.8 |
| type ii secretion system inner membrane protein gspf | ATN00_RS12815 | P31705 | Positive | 2588014 - 2589231 | 44257.9 |
| type ii secretion system major pseudopilin gspg | ATN00_RS12820 | P45773 | Positive | 2589394 - 2589855 | 16638.9 |
| type ii secretion system minor pseudopilin gsph | ATN00_RS12825 | Not Available | Positive | 2590057 - 2590539 | 17255.8 |
| type ii secretion system minor pseudopilin gspi | ATN00_RS12830 | Q00516 | Positive | 2590532 - 2590909 | 13350.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

