Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | ATN00_RS12635 | Not Available | Positive | 2553991 - 2554926 | 35007.2 |
| sigma-70 family rna polymerase sigma factor | ATN00_RS12640 | L0TCG5 | Negative | 2554931 - 2555791 | 31951.6 |
| carboxymuconolactone decarboxylase family protein | ATN00_RS12645 | P96684 | Negative | 2555791 - 2556249 | 16948.2 |
| response regulator transcription factor ctra | ATN00_RS12650 | P0CAW8 | Negative | 2556495 - 2557202 | 26407.1 |
| lysr family transcriptional regulator | ATN00_RS12655 | P52689 | Negative | 2557413 - 2558306 | 32265.6 |
| pirin family protein | ATN00_RS12660 | P58113 | Positive | 2558415 - 2559134 | 26073.3 |
| nad(p)h:quinone oxidoreductase | ATN00_RS12665 | B3QFA1 | Positive | 2559228 - 2559827 | 20702.7 |
| metallophosphoesterase | ATN00_RS12670 | Not Available | Negative | 2559960 - 2560745 | 28884.2 |
| dctp deaminase | ATN00_RS12675 | Q2GC28 | Negative | 2560767 - 2561321 | 20453.3 |
| cytidine deaminase | ATN00_RS12680 | P9WPH2 | Negative | 2561328 - 2561789 | 15497.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

