Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS12585 | Not Available | Negative | 2545336 - 2545515 | 6173.86 |
| Trna-leu | Not Available | Not Available | Positive | 2545658 - 2545742 | Not Available |
| trigger factor | ATN00_RS12595 | Q1GUW1 | Positive | 2545809 - 2547413 | 58292.9 |
| glycosyltransferase family 2 protein | ATN00_RS12600 | P37787 | Positive | 2547558 - 2548535 | 35796.6 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | ATN00_RS12605 | Q1GPH5 | Positive | 2548626 - 2549261 | 23332.2 |
| atp-dependent clp protease atp-binding subunit clpx | ATN00_RS12610 | Q5NNY7 | Positive | 2549396 - 2550664 | 45957.4 |
| rcnb family protein | ATN00_RS12615 | Not Available | Negative | 2550865 - 2551908 | 37097.9 |
| gaf domain-containing protein | ATN00_RS12620 | O66116 | Negative | 2552054 - 2552539 | 16843.2 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | ATN00_RS12625 | P40711 | Negative | 2552626 - 2553048 | 15315.6 |
| rlua family pseudouridine synthase | ATN00_RS12630 | O66114 | Negative | 2553227 - 2553901 | 24038.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

