Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4238 domain-containing protein | ATN00_RS12485 | Not Available | Negative | 2526207 - 2527307 | 41408.6 |
| tir domain-containing protein | ATN00_RS12490 | P0DV41 | Negative | 2527400 - 2528329 | 33835.9 |
| mov34/mpn/pad-1 family protein | ATN00_RS12495 | Not Available | Negative | 2528326 - 2528889 | 21226.3 |
| thif family adenylyltransferase | ATN00_RS12500 | Not Available | Negative | 2528867 - 2530561 | 60420.4 |
| adenylate/guanylate cyclase domain-containing protein | ATN00_RS12505 | P0DV40 | Negative | 2530570 - 2532150 | 55885.1 |
| tetratricopeptide repeat protein | ATN00_RS12510 | Not Available | Positive | 2532296 - 2535397 | 113674.0 |
| adenylate/guanylate cyclase domain-containing protein | ATN00_RS12515 | A0A1V0HUX5 | Negative | 2535453 - 2536160 | 25882.9 |
| pycsar system effector family protein | ATN00_RS12520 | Not Available | Negative | 2536166 - 2536669 | 18778.9 |
| hypothetical protein | ATN00_RS12525 | Not Available | Positive | 2537142 - 2537438 | 10791.3 |
| four-helix bundle copper-binding protein | ATN00_RS12530 | Not Available | Positive | 2537438 - 2537827 | 14160.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

