Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase domain-containing protein | ATN00_RS00345 | O28987 | Negative | 65935 - 66489 | 19675.6 |
| dna topoisomerase ib | ATN00_RS00350 | Q7T6X9 | Positive | 66607 - 67614 | 37798.6 |
| mechanosensitive ion channel family protein | ATN00_RS00355 | Q58543 | Positive | 67645 - 68808 | 42258.4 |
| hypothetical protein | ATN00_RS00360 | Not Available | Positive | 68919 - 69317 | 13693.4 |
| n-acetyl-d-glu racemase dgca | ATN00_RS00365 | P51981 | Negative | 69311 - 70288 | 34095.0 |
| rcnb family protein | ATN00_RS00370 | Not Available | Positive | 70580 - 71512 | 36701.9 |
| 2og-fe(ii) oxygenase | ATN00_RS00375 | Q24JN5 | Positive | 71628 - 72305 | 25125.8 |
| rcnb family protein | ATN00_RS00380 | Not Available | Positive | 72476 - 72946 | 18968.4 |
| lysine--trna ligase | ATN00_RS00385 | B0T2A6 | Negative | 73158 - 74738 | 58875.1 |
| pilz domain-containing protein | ATN00_RS00390 | Not Available | Positive | 74866 - 75249 | 14163.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

