Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | ATN00_RS12385 | Not Available | Negative | 2510381 - 2511124 | 27810.0 |
| catalase | ATN00_RS12390 | Q9X576 | Positive | 2511406 - 2513487 | 75937.0 |
| duf3175 domain-containing protein | ATN00_RS12395 | Not Available | Positive | 2513736 - 2514041 | 11319.4 |
| hypothetical protein | ATN00_RS12400 | Not Available | Positive | 2514034 - 2514300 | 9470.83 |
| duf2171 domain-containing protein | ATN00_RS12405 | Not Available | Positive | 2514326 - 2514592 | 9255.78 |
| fad-binding oxidoreductase | ATN00_RS12410 | Not Available | Negative | 2514614 - 2515834 | 43598.0 |
| flavodoxin family protein | ATN00_RS12415 | O69443 | Negative | 2515866 - 2516474 | 21501.8 |
| zf-tfiib domain-containing protein | ATN00_RS12420 | Not Available | Positive | 2516973 - 2517281 | 11420.5 |
| alpha-ketoglutarate-dependent dioxygenase alkb | ATN00_RS12425 | Not Available | Positive | 2517386 - 2517976 | 22174.5 |
| hypothetical protein | ATN00_RS12430 | Not Available | Negative | 2517983 - 2518558 | 21322.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

