Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS12285 | Not Available | Negative | 2495081 - 2495836 | 27057.0 |
| parb/repb/spo0j family partition protein | ATN00_RS12290 | Not Available | Negative | 2495950 - 2498112 | 78511.8 |
| sos response-associated peptidase family protein | ATN00_RS12295 | Not Available | Positive | 2498320 - 2498934 | 23266.9 |
| type ii toxin-antitoxin system pemk/mazf family toxin | ATN00_RS12300 | Not Available | Negative | 2498950 - 2499390 | 16131.3 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | ATN00_RS12305 | Not Available | Negative | 2499393 - 2499653 | 9672.35 |
| duf2958 domain-containing protein | ATN00_RS12310 | Not Available | Negative | 2500043 - 2500408 | 13021.6 |
| duf2155 domain-containing protein | ATN00_RS12315 | Not Available | Negative | 2500405 - 2500704 | 10806.5 |
| tyrosine-type recombinase/integrase | ATN00_RS12320 | P55636 | Negative | 2500815 - 2501807 | 36846.8 |
| tyrosine-type recombinase/integrase | ATN00_RS12325 | B6IPE2 | Negative | 2501804 - 2502745 | 34959.0 |
| tyrosine-type recombinase/integrase | ATN00_RS12330 | P55634 | Negative | 2502742 - 2503953 | 44564.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

