Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| higa family addiction module antitoxin | ATN00_RS12235 | Not Available | Negative | 2485072 - 2485374 | 11018.4 |
| type ii toxin-antitoxin system rele/pare family toxin | ATN00_RS12240 | Not Available | Negative | 2485374 - 2485655 | 10290.3 |
| duf2493 domain-containing protein | ATN00_RS12245 | Not Available | Negative | 2485713 - 2486597 | 33145.4 |
| toprim domain-containing protein | ATN00_RS12250 | Not Available | Negative | 2487013 - 2488068 | 38067.7 |
| bifunctional class i sam-dependent methyltransferase/dead/deah box helicase | ATN00_RS12255 | Q5BJL5 | Negative | 2488081 - 2492421 | 157708.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | ATN00_RS12260 | Not Available | Positive | 2492637 - 2492879 | 8880.56 |
| type ii toxin-antitoxin system vapc family toxin | ATN00_RS12265 | Not Available | Positive | 2492879 - 2493301 | 15074.1 |
| duf7007 domain-containing protein | ATN00_RS12270 | Not Available | Negative | 2493372 - 2494178 | 29859.9 |
| hypothetical protein | ATN00_RS12275 | Not Available | Negative | 2494175 - 2494666 | 17854.2 |
| hypothetical protein | ATN00_RS12280 | Not Available | Negative | 2494796 - 2494990 | 6780.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

