Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2274 domain-containing protein | ATN00_RS12035 | Not Available | Negative | 2447489 - 2447722 | 8282.14 |
| trbi/virb10 family protein | ATN00_RS12040 | Not Available | Negative | 2447719 - 2449077 | 46844.1 |
| p-type conjugative transfer protein trbg | ATN00_RS12045 | Not Available | Negative | 2449074 - 2450111 | 37124.3 |
| conjugal transfer protein trbf | ATN00_RS12050 | Not Available | Negative | 2450108 - 2450791 | 25465.2 |
| p-type conjugative transfer protein trbl | ATN00_RS12055 | Not Available | Negative | 2450798 - 2452174 | 45170.7 |
| putative entry exclusion protein trbk-alt | ATN00_RS12060 | Not Available | Negative | 2452171 - 2452422 | 8874.63 |
| p-type conjugative transfer protein trbj | ATN00_RS12065 | Not Available | Negative | 2452450 - 2453172 | 25842.4 |
| conjugal transfer protein trbe | ATN00_RS12070 | P54910 | Negative | 2453169 - 2455619 | 89289.5 |
| virb3 family type iv secretion system protein | ATN00_RS12075 | Not Available | Negative | 2455635 - 2455907 | 9572.66 |
| trbc/virb2 family protein | ATN00_RS12080 | Not Available | Negative | 2455907 - 2456239 | 11270.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

