Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside diphosphate kinase regulator | ATN00_RS11885 | Not Available | Positive | 2408073 - 2408486 | 14946.1 |
| nadp-specific glutamate dehydrogenase | ATN00_RS11890 | Q8RQP4 | Positive | 2408577 - 2409926 | 48710.1 |
| rod shape-determining protein | ATN00_RS11895 | A0A0H3C7V4 | Negative | 2410052 - 2411059 | 35483.1 |
| voc family protein | ATN00_RS11900 | Not Available | Negative | 2411182 - 2411586 | 14612.6 |
| sugar phosphate isomerase/epimerase | ATN00_RS11905 | Not Available | Negative | 2411612 - 2412430 | 30042.4 |
| smp-30/gluconolactonase/lre family protein | ATN00_RS11910 | Not Available | Positive | 2412728 - 2413648 | 32238.3 |
| hypothetical protein | ATN00_RS11915 | Not Available | Positive | 2413784 - 2414110 | 11818.6 |
| site-specific integrase | ATN00_RS11920 | Not Available | Positive | 2414665 - 2416032 | 50412.9 |
| hu family dna-binding protein | ATN00_RS11925 | I1WEI8 | Negative | 2416143 - 2416418 | 9607.31 |
| hypothetical protein | ATN00_RS11930 | Not Available | Negative | 2416651 - 2417136 | 17120.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

