Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphogluconate dehydratase | ATN00_RS11685 | P21909 | Positive | 2369741 - 2371573 | 64990.3 |
| glucokinase | ATN00_RS11690 | P21908 | Positive | 2371570 - 2372535 | 34567.6 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | ATN00_RS11695 | Q00384 | Positive | 2372536 - 2373153 | 21196.2 |
| hypothetical protein | ATN00_RS23430 | Not Available | Negative | 2373248 - 2374207 | 34926.2 |
| 6-phosphogluconolactonase | ATN00_RS11705 | Q9EV79 | Negative | 2374234 - 2374929 | 24165.1 |
| ybak/ebsc family protein | ATN00_RS11710 | Not Available | Negative | 2374926 - 2375402 | 16239.5 |
| udp-glucose 4-epimerase gale | ATN00_RS11715 | Q59083 | Negative | 2375399 - 2376403 | 36195.2 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | ATN00_RS11720 | A1S7L6 | Negative | 2376470 - 2378647 | 77157.8 |
| acetyl-coa c-acetyltransferase | ATN00_RS11725 | Not Available | Negative | 2378743 - 2379951 | 42224.8 |
| mfs transporter | ATN00_RS11730 | Q2FW71 | Positive | 2380174 - 2381835 | 58766.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

