Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | ATN00_RS11540 | Q2KCN1 | Negative | 2340368 - 2341600 | 42581.2 |
| p-type conjugative transfer atpase trbb | ATN00_RS11545 | Not Available | Positive | 2341932 - 2342921 | 34529.4 |
| trbc/virb2 family protein | ATN00_RS11550 | Not Available | Positive | 2342918 - 2343250 | 11560.3 |
| virb3 family type iv secretion system protein | ATN00_RS11555 | Not Available | Positive | 2343250 - 2343531 | 10034.5 |
| conjugal transfer protein trbe | ATN00_RS11560 | Not Available | Positive | 2343545 - 2346001 | 89618.7 |
| p-type conjugative transfer protein trbj | ATN00_RS11565 | Not Available | Positive | 2345998 - 2346777 | 28031.1 |
| putative entry exclusion protein trbk-alt | ATN00_RS11570 | Not Available | Positive | 2346788 - 2347075 | 10285.3 |
| p-type conjugative transfer protein trbl | ATN00_RS11575 | Not Available | Positive | 2347079 - 2348437 | 44469.7 |
| conjugal transfer protein trbf | ATN00_RS11580 | Not Available | Positive | 2348434 - 2349123 | 25944.6 |
| p-type conjugative transfer protein trbg | ATN00_RS11585 | Not Available | Positive | 2349120 - 2350103 | 35154.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

