Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family protein | ATN00_RS00250 | Not Available | Positive | 50772 - 51539 | 27107.3 |
| 50s ribosomal protein l34 | ATN00_RS00255 | A5VCE4 | Positive | 51726 - 51860 | 5122.37 |
| ribonuclease p protein component | ATN00_RS00260 | Q2N7X0 | Positive | 51905 - 52312 | 15089.5 |
| membrane protein insertion efficiency factor yidd | ATN00_RS00265 | Q2GAU9 | Positive | 52309 - 52521 | 7699.55 |
| membrane protein insertase yidc | ATN00_RS00270 | Q9RNL5 | Positive | 52558 - 54261 | 63321.9 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | ATN00_RS00275 | Q1GN74 | Positive | 54283 - 54930 | 23797.8 |
| alkylphosphonate utilization protein | ATN00_RS00280 | P0AFJ3 | Positive | 54943 - 55245 | 10848.8 |
| 2'-5' rna ligase family protein | ATN00_RS00285 | Not Available | Negative | 55253 - 55810 | 21078.4 |
| duf3175 domain-containing protein | ATN00_RS00290 | Not Available | Negative | 55907 - 56194 | 10839.9 |
| carbon starvation csta family protein | ATN00_RS00295 | P15078 | Positive | 56349 - 58397 | 72034.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

