Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | ATN00_RS11345 | Not Available | Positive | 2296485 - 2296868 | 14115.0 |
| site-specific dna-methyltransferase | ATN00_RS11350 | P08763 | Positive | 2296980 - 2298980 | 75751.5 |
| dead/deah box helicase family protein | ATN00_RS11355 | Not Available | Positive | 2298980 - 2301313 | 85666.3 |
| hypothetical protein | ATN00_RS11360 | Not Available | Positive | 2301398 - 2302324 | 34383.0 |
| imua family protein | ATN00_RS11365 | Not Available | Positive | 2302451 - 2303176 | 25131.2 |
| dna polymerase y family protein | ATN00_RS11370 | Not Available | Positive | 2303091 - 2304611 | 54804.3 |
| error-prone dna polymerase | ATN00_RS11375 | Q92ZJ6 | Positive | 2304608 - 2307880 | 122072.0 |
| hypothetical protein | ATN00_RS11380 | Not Available | Positive | 2307960 - 2308751 | 28798.6 |
| duf2155 domain-containing protein | ATN00_RS22900 | Not Available | Positive | 2309008 - 2309661 | 24103.6 |
| tyrosine-type recombinase/integrase | ATN00_RS11390 | Not Available | Negative | 2309744 - 2310736 | 36846.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

