Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| head gin domain-containing protein | ATN00_RS11295 | Not Available | Negative | 2288381 - 2289106 | 24099.9 |
| head gin domain-containing protein | ATN00_RS11300 | Not Available | Negative | 2289058 - 2289801 | 24848.5 |
| porphobilinogen synthase | ATN00_RS11305 | P45622 | Positive | 2290109 - 2291104 | 35694.6 |
| gamma carbonic anhydrase family protein | ATN00_RS11310 | Q9C6B3 | Positive | 2291158 - 2291730 | 20282.6 |
| hypothetical protein | ATN00_RS11315 | Not Available | Negative | 2291736 - 2292248 | 17406.5 |
| hypothetical protein | ATN00_RS11320 | Not Available | Negative | 2292301 - 2292564 | 9615.8 |
| pyridoxal phosphate-dependent aminotransferase | ATN00_RS11325 | P96847 | Positive | 2292630 - 2293772 | 40963.2 |
| duf2155 domain-containing protein | ATN00_RS11330 | Not Available | Positive | 2294380 - 2295543 | 43896.2 |
| helix-turn-helix domain-containing protein | ATN00_RS11335 | Not Available | Positive | 2295788 - 2296090 | 11302.4 |
| type ii toxin-antitoxin system rele/pare family toxin | ATN00_RS11340 | O53468 | Positive | 2296103 - 2296483 | 14177.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

