Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | ATN00_RS10890 | P06610 | Positive | 2203690 - 2204235 | 19348.9 |
| trimeric intracellular cation channel family protein | ATN00_RS10895 | Q9KPI5 | Positive | 2204418 - 2205065 | 22609.3 |
| signal peptide peptidase sppa | ATN00_RS10900 | P08395 | Negative | 2205095 - 2206978 | 66184.3 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | ATN00_RS10905 | A5VB15 | Positive | 2207133 - 2207819 | 25927.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | ATN00_RS10910 | Q8FYW3 | Positive | 2207967 - 2208461 | 16694.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | ATN00_RS10915 | P52559 | Positive | 2208463 - 2209533 | 37633.6 |
| dihydrofolate reductase | ATN00_RS10920 | P12833 | Positive | 2209542 - 2210030 | 17925.7 |
| bifunctional riboflavin kinase/fad synthetase | ATN00_RS10925 | P22990 | Positive | 2210077 - 2211015 | 33871.7 |
| isoleucine--trna ligase | ATN00_RS10930 | Q5NQQ7 | Positive | 2211061 - 2213949 | 108349.0 |
| signal peptidase ii | ATN00_RS10935 | A5VCW2 | Positive | 2213946 - 2214464 | 19188.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

