Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | ATN00_RS10790 | Not Available | Negative | 2184649 - 2185116 | 16993.4 |
| d-glycerate dehydrogenase | ATN00_RS10795 | Not Available | Positive | 2185242 - 2186240 | 35921.6 |
| copper resistance protein b | ATN00_RS10800 | P12375 | Negative | 2186514 - 2187407 | 32744.1 |
| copper resistance system multicopper oxidase | ATN00_RS10805 | P59571 | Negative | 2187404 - 2189170 | 64371.8 |
| rna polymerase sigma factor | ATN00_RS10810 | P37978 | Negative | 2189179 - 2189751 | 20752.2 |
| spy/cpxp family protein refolding chaperone | ATN00_RS10815 | Not Available | Negative | 2189757 - 2190197 | 15694.2 |
| hypothetical protein | ATN00_RS10820 | Not Available | Negative | 2190194 - 2190457 | 8987.87 |
| duf1328 domain-containing protein | ATN00_RS10825 | Not Available | Positive | 2190579 - 2190764 | 6143.17 |
| duf5818 domain-containing protein | ATN00_RS10830 | Not Available | Positive | 2190769 - 2190972 | 7324.77 |
| aconitate hydratase acna | ATN00_RS10835 | Q9I3F5 | Positive | 2191614 - 2194283 | 95793.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

