Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | ATN00_RS10640 | Not Available | Positive | 2149871 - 2150770 | 31134.2 |
| duf6491 family protein | ATN00_RS10645 | Not Available | Positive | 2150871 - 2151251 | 13440.9 |
| trna pseudouridine(55) synthase trub | ATN00_RS10650 | Q2G5F3 | Positive | 2151284 - 2152177 | 30884.6 |
| 30s ribosomal protein s15 | ATN00_RS10655 | Q5NQ31 | Positive | 2152195 - 2152464 | 10232.3 |
| polyribonucleotide nucleotidyltransferase | ATN00_RS10660 | Q1GVQ8 | Positive | 2152639 - 2154942 | 83044.5 |
| hypothetical protein | ATN00_RS23425 | Not Available | Negative | 2155164 - 2155907 | 27056.5 |
| sensor histidine kinase | ATN00_RS10670 | Not Available | Positive | 2156094 - 2157122 | 36836.2 |
| outer membrane protein assembly factor bamd | ATN00_RS10675 | Q9A6U9 | Positive | 2157171 - 2157944 | 29334.0 |
| dna repair protein recn | ATN00_RS10680 | Q87BS5 | Positive | 2157989 - 2159650 | 58465.3 |
| nad-dependent dna ligase liga | ATN00_RS10685 | Q1GVQ2 | Positive | 2159700 - 2161841 | 77630.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

