Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine o-acetyltransferase epsc | ATN00_RS10590 | Q59967 | Positive | 2138573 - 2139583 | 36354.2 |
| glycosyltransferase family 39 protein | ATN00_RS10595 | Not Available | Positive | 2139654 - 2141240 | 58556.1 |
| hypothetical protein | ATN00_RS10600 | Not Available | Negative | 2141206 - 2141388 | 6288.73 |
| acyl-coa dehydrogenase | ATN00_RS10605 | Q5LLW7 | Positive | 2141559 - 2143292 | 61103.5 |
| ribosome maturation protein rimp | ATN00_RS10610 | A5VCZ9 | Positive | 2143430 - 2143954 | 19025.5 |
| transcription termination factor nusa | ATN00_RS10615 | Q92HF4 | Positive | 2143968 - 2145539 | 58047.0 |
| 4-oxalocrotonate tautomerase family protein | ATN00_RS10620 | Not Available | Positive | 2145546 - 2145797 | 8449.99 |
| duf448 domain-containing protein | ATN00_RS10625 | Not Available | Positive | 2145891 - 2146547 | 22831.6 |
| translation initiation factor if-2 | ATN00_RS10630 | Q1GVI9 | Positive | 2146617 - 2149202 | 92997.8 |
| 30s ribosome-binding factor rbfa | ATN00_RS10635 | Q1GVI8 | Positive | 2149306 - 2149701 | 14968.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

