Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | ATN00_RS10355 | Not Available | Negative | 2087551 - 2088066 | 18213.1 |
| duf1778 domain-containing protein | ATN00_RS10360 | Not Available | Negative | 2088082 - 2088390 | 11431.7 |
| conjugal transfer protein trag | ATN00_RS10365 | Q00185 | Positive | 2088473 - 2090458 | 72583.9 |
| copg family transcriptional regulator | ATN00_RS10370 | Not Available | Positive | 2090467 - 2090889 | 15882.0 |
| type ii toxin-antitoxin system pard family antitoxin | ATN00_RS10375 | Not Available | Positive | 2091003 - 2091260 | 9083.77 |
| type ii toxin-antitoxin system higa family antitoxin | ATN00_RS10380 | Not Available | Negative | 2091330 - 2091695 | 13881.5 |
| p-type conjugative transfer atpase trbb | ATN00_RS10385 | P55395 | Positive | 2091948 - 2092934 | 34676.0 |
| trbc/virb2 family protein | ATN00_RS10390 | Not Available | Positive | 2092931 - 2093263 | 11342.1 |
| virb3 family type iv secretion system protein | ATN00_RS10395 | Not Available | Positive | 2093263 - 2093532 | 9625.88 |
| conjugal transfer protein trbe | ATN00_RS10400 | Not Available | Positive | 2093529 - 2096000 | 90125.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

