Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | ATN00_RS09970 | Q2UPA7 | Positive | 2014108 - 2015187 | 37517.0 |
| smp-30/gluconolactonase/lre family protein | ATN00_RS09975 | Not Available | Positive | 2015184 - 2016098 | 31605.4 |
| limonene-1,2-epoxide hydrolase family protein | ATN00_RS09980 | Not Available | Positive | 2016205 - 2016645 | 16460.7 |
| nad(p)-dependent oxidoreductase | ATN00_RS09985 | Q9XTI0 | Positive | 2016984 - 2017826 | 29417.9 |
| cytochrome p450 | ATN00_RS09990 | Not Available | Negative | 2018009 - 2019229 | 46641.9 |
| nuclear transport factor 2 family protein | ATN00_RS09995 | Not Available | Negative | 2019507 - 2020022 | 19139.7 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | ATN00_RS10000 | O22553 | Negative | 2020042 - 2021229 | 44459.1 |
| hypothetical protein | ATN00_RS10005 | Not Available | Negative | 2021289 - 2021651 | 13366.0 |
| nuclear transport factor 2 family protein | ATN00_RS10010 | Not Available | Negative | 2021744 - 2022100 | 13152.6 |
| ecdysteroid 22-kinase family protein | ATN00_RS10015 | Not Available | Negative | 2022161 - 2023204 | 39202.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

