Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | ATN00_RS00100 | Not Available | Positive | 17782 - 19035 | 43521.9 |
| ai-2e family transporter | ATN00_RS00105 | O25291 | Positive | 19100 - 20200 | 39068.3 |
| abc-f family atp-binding cassette domain-containing protein | ATN00_RS00110 | A0A0H2VBH0 | Negative | 20349 - 22217 | 67717.1 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | ATN00_RS00115 | Q56078 | Negative | 22416 - 24713 | 82136.2 |
| multidrug efflux smr transporter | ATN00_RS00120 | Q8XDQ5 | Negative | 24788 - 25108 | 10935.9 |
| Trna-tyr | Not Available | Not Available | Positive | 25200 - 25286 | Not Available |
| rna methyltransferase | ATN00_RS00130 | P74328 | Positive | 25385 - 26128 | 26429.7 |
| hypothetical protein | ATN00_RS00135 | Not Available | Positive | 26157 - 26912 | 27156.0 |
| 2fe-2s iron-sulfur cluster-binding protein | ATN00_RS00140 | Not Available | Negative | 26967 - 27284 | 11489.5 |
| dna-3-methyladenine glycosylase | ATN00_RS00145 | Q92383 | Positive | 27362 - 27979 | 22368.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

