Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | ATN00_RS09820 | Not Available | Positive | 1969276 - 1971813 | 92302.2 |
| pkd domain-containing protein | ATN00_RS09825 | Not Available | Positive | 1971928 - 1974024 | 76617.2 |
| tannase/feruloyl esterase family alpha/beta hydrolase | ATN00_RS09830 | B8NPA4 | Positive | 1974074 - 1975744 | 59495.8 |
| pkd domain-containing protein | ATN00_RS09835 | Not Available | Positive | 1975843 - 1978011 | 79620.4 |
| cytochrome p450 | ATN00_RS09840 | Q53215 | Negative | 1978168 - 1979373 | 45277.9 |
| hypothetical protein | ATN00_RS23400 | Not Available | Negative | 1979574 - 1979750 | 6539.82 |
| tonb-dependent receptor | ATN00_RS09845 | Not Available | Positive | 1979853 - 1982258 | 85086.3 |
| hypothetical protein | ATN00_RS23670 | Not Available | Negative | 1982483 - 1982680 | 7124.52 |
| helix-turn-helix transcriptional regulator | ATN00_RS23675 | Not Available | Positive | 1982720 - 1983298 | 20937.2 |
| limonene-1,2-epoxide hydrolase family protein | ATN00_RS09860 | Not Available | Positive | 1983416 - 1983850 | 16243.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

