Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system aminomethyltransferase gcvt | ATN00_RS09525 | O14110 | Positive | 1909654 - 1910811 | 41854.2 |
| glycine cleavage system protein gcvh | ATN00_RS09530 | A7HQX9 | Positive | 1910833 - 1911204 | 13430.3 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | ATN00_RS09535 | A5V9T6 | Positive | 1911254 - 1912612 | 48017.9 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | ATN00_RS09540 | Q9A354 | Positive | 1912609 - 1914180 | 55671.9 |
| duf938 domain-containing protein | ATN00_RS09545 | Q9DCS2 | Positive | 1914177 - 1914821 | 23050.9 |
| hypothetical protein | ATN00_RS09550 | Not Available | Positive | 1914833 - 1915756 | 33999.1 |
| atp-binding protein | ATN00_RS09555 | Q4ZSY3 | Negative | 1915713 - 1917704 | 72753.0 |
| serine palmitoyltransferase | ATN00_RS09560 | Q93UV0 | Negative | 1917827 - 1919059 | 44309.4 |
| acyl carrier protein | ATN00_RS09565 | Not Available | Negative | 1919149 - 1919391 | 8855.56 |
| etc complex i subunit | ATN00_RS09570 | Not Available | Negative | 1919492 - 1919770 | 10258.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

