Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsre family protein | ATN00_RS00050 | Not Available | Positive | 9234 - 9599 | 12397.1 |
| threonine--trna ligase | ATN00_RS00055 | Q2GBX1 | Positive | 9701 - 11692 | 74914.1 |
| translation initiation factor if-3 | ATN00_RS00060 | Q5NL80 | Positive | 11820 - 12353 | 20385.0 |
| peptide-methionine (s)-s-oxide reductase msra | ATN00_RS00065 | Q98DV6 | Negative | 12456 - 13127 | 24385.2 |
| hypothetical protein | ATN00_RS00070 | Not Available | Negative | 13114 - 13341 | 8234.18 |
| pyridoxal phosphate-dependent aminotransferase | ATN00_RS00075 | A3PMF8 | Negative | 13498 - 14700 | 42703.8 |
| aminotransferase class iv | ATN00_RS00080 | Not Available | Negative | 14811 - 15434 | 23324.3 |
| aminodeoxychorismate synthase component i | ATN00_RS00085 | P12679 | Negative | 15469 - 16650 | 42385.9 |
| duf983 domain-containing protein | ATN00_RS00090 | Not Available | Positive | 16758 - 17141 | 14050.4 |
| thioesterase family protein | ATN00_RS00095 | Not Available | Negative | 17152 - 17589 | 16366.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

