Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gldg family protein | ATN00_RS09425 | Not Available | Positive | 1885708 - 1886934 | 44419.4 |
| division/cell wall cluster transcriptional repressor mraz | ATN00_RS09430 | Not Available | Positive | 1887122 - 1887619 | 18844.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | ATN00_RS09435 | A5VDD4 | Positive | 1887616 - 1888581 | 35105.5 |
| hypothetical protein | ATN00_RS09440 | Not Available | Positive | 1888578 - 1889228 | 23768.6 |
| penicillin-binding protein 2 | ATN00_RS09445 | B8H0A0 | Positive | 1889228 - 1890943 | 61798.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | ATN00_RS09450 | Q9RNM2 | Positive | 1890940 - 1892385 | 50711.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | ATN00_RS09455 | O33804 | Positive | 1892382 - 1893776 | 48110.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | ATN00_RS09460 | A5VDC9 | Positive | 1893776 - 1894849 | 38568.2 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | ATN00_RS09465 | Q2G997 | Positive | 1894852 - 1896168 | 46010.9 |
| putative lipid ii flippase ftsw | ATN00_RS09470 | B8H092 | Positive | 1896197 - 1897399 | 43608.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

