Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | ATN00_RS09180 | A5VPX5 | Positive | 1843082 - 1843561 | 17602.6 |
| 30s ribosomal protein s9 | ATN00_RS09185 | A7INH2 | Positive | 1843561 - 1844106 | 19317.0 |
| csbd family protein | ATN00_RS09190 | Not Available | Positive | 1844306 - 1844488 | 6048.22 |
| sodium:alanine symporter family protein | ATN00_RS09195 | Q6LX42 | Negative | 1844569 - 1845954 | 48665.3 |
| phosphoglucosamine mutase | ATN00_RS09200 | Q1GUJ4 | Positive | 1846048 - 1847388 | 47478.1 |
| duf1272 domain-containing protein | ATN00_RS09205 | P42878 | Positive | 1847388 - 1847612 | 8093.78 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | ATN00_RS09210 | P61422 | Positive | 1847609 - 1848370 | 25724.4 |
| ribonuclease hii | ATN00_RS09215 | A5VF46 | Positive | 1848363 - 1848962 | 21499.0 |
| l,d-transpeptidase family protein | ATN00_RS09220 | Not Available | Positive | 1849122 - 1849745 | 22817.5 |
| alkyl hydroperoxide reductase subunit f | ATN00_RS09225 | Q9I6Z2 | Negative | 1849944 - 1851527 | 56330.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

