Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-layer family protein | ATN00_RS09080 | Not Available | Positive | 1811258 - 1820476 | 304572.0 |
| ompa family protein | ATN00_RS09085 | Not Available | Positive | 1820527 - 1821240 | 24741.3 |
| tolc family protein | ATN00_RS09090 | Not Available | Positive | 1821257 - 1822645 | 51354.4 |
| type i secretion system permease/atpase | ATN00_RS09095 | P26760 | Positive | 1822683 - 1824854 | 79744.3 |
| cell wall hydrolase | ATN00_RS09100 | Not Available | Positive | 1824851 - 1825876 | 36549.5 |
| hlyd family type i secretion periplasmic adaptor subunit | ATN00_RS09105 | Not Available | Positive | 1825873 - 1827162 | 46415.6 |
| transglutaminase-like cysteine peptidase | ATN00_RS09110 | Not Available | Negative | 1827169 - 1828182 | 36873.2 |
| nudix domain-containing protein | ATN00_RS09115 | Not Available | Positive | 1828637 - 1829401 | 27400.7 |
| extensin family protein | ATN00_RS09120 | Not Available | Positive | 1829404 - 1830129 | 26454.1 |
| anthranilate synthase component i | ATN00_RS09125 | P95646 | Negative | 1830143 - 1831672 | 54327.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

