Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative glutaredoxin | ATN00_RS19010 | P0AC64 | Negative | 3886273 - 3886530 | 9252.3 |
| hd-gyp domain-containing protein | ATN00_RS00005 | Q9HWS0 | Positive | 3 - 1307 | 48936.7 |
| chromosomal replication initiator protein dnaa | ATN00_RS00010 | Q1GN68 | Negative | 1399 - 2814 | 51751.9 |
| 30s ribosomal protein s20 | ATN00_RS00015 | A5VG07 | Negative | 3235 - 3498 | 9313.52 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | ATN00_RS00020 | A5VG06 | Negative | 3612 - 4424 | 29416.7 |
| class i sam-dependent methyltransferase | ATN00_RS00025 | Q9X3X2 | Positive | 4508 - 5239 | 27577.0 |
| 2-polyprenylphenol 6-hydroxylase | ATN00_RS00030 | B1XWR5 | Positive | 5246 - 6787 | 56769.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | ATN00_RS00035 | P44953 | Positive | 6784 - 8043 | 44065.4 |
| dutp diphosphatase | ATN00_RS00040 | A5VG00 | Positive | 8018 - 8482 | 16108.4 |
| hesa/moeb/thif family protein | ATN00_RS00045 | D4GSF3 | Positive | 8479 - 9246 | 26517.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

