Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase family protein | ATN00_RS08890 | Not Available | Negative | 1773770 - 1774852 | 39393.1 |
| tigr03857 family llm class f420-dependent oxidoreductase | ATN00_RS08895 | Not Available | Positive | 1774970 - 1776079 | 38698.9 |
| sdr family nad(p)-dependent oxidoreductase | ATN00_RS08900 | Q9LBV3 | Positive | 1776076 - 1776828 | 25706.1 |
| mfs transporter | ATN00_RS08905 | Not Available | Positive | 1776828 - 1778141 | 46257.0 |
| helix-turn-helix transcriptional regulator | ATN00_RS08910 | Not Available | Positive | 1778225 - 1778434 | 7723.27 |
| duf4917 family protein | ATN00_RS08915 | Not Available | Negative | 1778505 - 1778813 | 11593.7 |
| type ii toxin-antitoxin system pard family antitoxin | ATN00_RS08920 | Not Available | Positive | 1779230 - 1779508 | 10221.9 |
| type ii toxin-antitoxin system rele/pare family toxin | ATN00_RS08925 | Not Available | Positive | 1779511 - 1779822 | 11785.1 |
| hypothetical protein | ATN00_RS08930 | Not Available | Negative | 1779901 - 1780410 | 18491.9 |
| hypothetical protein | ATN00_RS08935 | Not Available | Positive | 1780491 - 1780787 | 10846.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

