Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative quinol monooxygenase | ATN00_RS08640 | Not Available | Positive | 1729428 - 1729730 | 11469.8 |
| 3-dehydroquinate synthase | ATN00_RS08645 | Q5NPY8 | Negative | 1729827 - 1730942 | 39378.3 |
| shikimate kinase | ATN00_RS08650 | Q9A435 | Negative | 1730933 - 1731481 | 19803.2 |
| hypothetical protein | ATN00_RS08655 | Not Available | Positive | 1731567 - 1731752 | 7021.78 |
| hypothetical protein | ATN00_RS08660 | Not Available | Positive | 1731758 - 1733572 | 62716.9 |
| tyrosine recombinase | ATN00_RS08665 | Q2NB52 | Positive | 1733576 - 1734493 | 33264.2 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | ATN00_RS08670 | A5V3X0 | Positive | 1734505 - 1735449 | 33335.9 |
| m48 family metalloprotease | ATN00_RS08675 | Not Available | Positive | 1735697 - 1737118 | 49422.5 |
| flp family type ivb pilin | ATN00_RS08680 | Not Available | Negative | 1737201 - 1737383 | 6162.47 |
| flp family type ivb pilin | ATN00_RS08685 | Not Available | Negative | 1737520 - 1737705 | 6574.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

