Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | ATN00_RS08590 | A5V3G4 | Positive | 1719880 - 1720605 | 25912.4 |
| ribosome recycling factor | ATN00_RS08595 | A5V3G5 | Positive | 1720612 - 1721169 | 20170.2 |
| polyprenyl diphosphate synthase | ATN00_RS08600 | Q9X5F1 | Positive | 1721215 - 1721955 | 27286.8 |
| phosphatidate cytidylyltransferase | ATN00_RS08605 | Q8YHH2 | Positive | 1721961 - 1722737 | 26450.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | ATN00_RS08610 | Q9X5F2 | Positive | 1722737 - 1723894 | 40647.1 |
| rip metalloprotease rsep | ATN00_RS08615 | Q8UFL7 | Positive | 1723891 - 1725024 | 40648.6 |
| outer membrane protein assembly factor bama | ATN00_RS08620 | Not Available | Positive | 1725110 - 1727770 | 98408.3 |
| omph family outer membrane protein | ATN00_RS08625 | Not Available | Positive | 1727770 - 1728435 | 22679.0 |
| 3-hydroxyacyl-acp dehydratase fabz | ATN00_RS08630 | A5V3H2 | Positive | 1728442 - 1728924 | 16999.0 |
| 50s ribosomal protein l31 | ATN00_RS08635 | Q2G8J9 | Positive | 1729046 - 1729270 | 8336.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

