Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyrate dehydrogenase | ATN00_RS08540 | O86034 | Positive | 1709790 - 1710581 | 27633.3 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | ATN00_RS08545 | Q5NRH4 | Positive | 1710750 - 1712573 | 65351.8 |
| ktsc domain-containing protein | ATN00_RS08550 | Not Available | Negative | 1712577 - 1712774 | 7824.27 |
| carbon-nitrogen hydrolase family protein | ATN00_RS08555 | P54608 | Negative | 1712808 - 1714421 | 60233.7 |
| nadp-dependent isocitrate dehydrogenase | ATN00_RS08560 | P50215 | Negative | 1714509 - 1715729 | 45985.9 |
| phosphatidylserine decarboxylase | ATN00_RS08565 | Q1GRP7 | Positive | 1715902 - 1716636 | 26484.7 |
| phosphatidylcholine/phosphatidylserine synthase | ATN00_RS08570 | P9WPG1 | Positive | 1716647 - 1717423 | 28279.0 |
| hypothetical protein | ATN00_RS08575 | Not Available | Negative | 1717438 - 1717665 | 8437.66 |
| 30s ribosomal protein s2 | ATN00_RS08580 | Q2G8L0 | Positive | 1717916 - 1718674 | 27200.7 |
| translation elongation factor ts | ATN00_RS08585 | A5V3G3 | Positive | 1718780 - 1719709 | 31671.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

