Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS18965 | Not Available | Negative | 3880552 - 3880923 | 13833.2 |
| Major capsid protein | ATN00_RS18970 | B0ZSF3 | Positive | 3881044 - 3882249 | 42888.5 |
| Prohead protease | ATN00_RS18975 | Not Available | Positive | 3882249 - 3882794 | 19445.1 |
| Portal protein | ATN00_RS18980 | Not Available | Positive | 3882785 - 3883981 | 43263.1 |
| head-tail connector protein | ATN00_RS18985 | Not Available | Positive | 3883974 - 3884240 | 9559.71 |
| Putative head-tail adaptor | ATN00_RS18990 | Not Available | Positive | 3884245 - 3884559 | 12022.3 |
| Attr | Not Available | Not Available | Positive | 3884743 - 3884765 | Not Available |
| Trna-arg; | Not Available | Not Available | Positive | 3884718 - 3884794 | Not Available |
| duf1178 family protein | ATN00_RS19000 | Not Available | Negative | 3884964 - 3885440 | 16920.2 |
| carbon-nitrogen hydrolase family protein | ATN00_RS19005 | Q94JV5 | Negative | 3885437 - 3886267 | 30353.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

